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Tan2016stress
SRR1275489 |
SRR1275490 |
SRR1275491 |
SRR1275492 |
SRR1275493 |
SRR1275494 |
All metadata | TXT | 9 Kb |
TDFs (visualization files) | ZIP archive | 75 Mb |
Read counts and bidirectional calls | ZIP archive | 42 Mb |
SRP accession | SRP041793 |
GEO accession | GSE57430 |
Protocol | GRO-seq |
Organisms | H. sapiens |
Library Prep | ligation |
Spike-in | |
Published | Yes |
Year | 2016 |
First Author | Tan |
Last Author | Zon |
DOI | 10.1016/j.molcel.2016.03.013 |
Full citation | Justin L. Tan, Rachel D. Fogley, Ryan A. Flynn, Julien Ablain, Song Yang, Violaine Saint-Andre, Zi Peng Fan, Brian T. Do, Alvaro C. Laga, Koh Fujinaga, Cristina Santoriello, Celeste B. Greer, Yoon Jung Kim, John G. Clohessy, Anne Bothmer, Nicole Pandell, Serine Avagyan, John E. Brogie, Ellen van Rooijen, Elliott J. Hagedorn, Ng Shyh-Chang, Richard M. White, David H. Price, Pier Paolo Pandolfi, B. Matija Peterlin, Yi Zhou, Tae Hoon Kim, John M. Asara, Howard Y. Chang, Richard A. Young, and Leonard I. Zon. Stress from nucleotide depletion activates the transcriptional regulator HEXIM1 to suppress melanoma. Molecular Cell, 62(1):34-46, Apr 2016. |
Median QC score
|
4.0 |
ATAC-seq? | No |
RNA-seq? | Yes |
ChIP-seq? | Yes |
3D Seq? | No |
Other Seq? | Yes |