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Paper Details
Vihervaara2017transcriptional
| SRR4454567 |
| SRR4454568 |
| SRR4454569 |
| SRR4454570 |
| TDFs (visualization files) | Zip archive | 694 Mb |
| Read counts and bidirectional calls | Zip archive | 35 Mb |
| SRP accession | SRP092163 |
| GEO accession | GSE89230 |
| Protocol | PRO-seq |
| Organisms | H. sapiens |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2017 |
| First Author | Vihervaara |
| Last Author | Sistonen |
| DOI | 10.1038/s41467-017-00151-0 |
| Full citation | Anniina Vihervaara, Dig Bijay Mahat, Michael J. Guertin, Tinyi Chu, Charles G. Danko, John T. Lis, and Lea Sistonen. Transcriptional response to stress is pre-wired by promoter and enhancer architecture. Nat Commun, 8(1):255, 2017. |
|
Median QC score
|
1.5 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |