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Paper Details
Bouvyliivrand2017analysis
| TDFs (visualization files) | Zip archive | 1.2 Gb |
| Read counts and bidirectional calls | Zip archive | 142 Mb |
| SRP accession | SRP095085 |
| GEO accession | GSE92375 |
| Protocol | GRO-seq |
| Organisms | H. sapiens |
| Library Prep | circularization |
| Spike-in | |
| Published | Yes |
| Year | 2017 |
| First Author | Bouvy-Liivrand |
| Last Author | Heinaniemi |
| DOI | 10.1093/nar/gkx680 |
| Full citation | Maria Bouvy-Liivrand, Ana Hernandez de Sande, Petri Polonen, Juha Mehtonen, Tapio Vuorenmaa, Henri Niskanen, Lasse Sinkkonen, Minna Unelma Kaikkonen, and Merja Heinaniemi. Analysis of primary microRNA loci from nascent transcriptomes reveals regulatory domains governed by chromatin architecture. Nucleic Acids Research, 45(17):9837-9849, September 2017. |
|
Median QC score
|
2.0 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | No |