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Kaikkonen2014control
| SRR1035898 |
| SRR1035899 |
| SRR1035900 |
| SRR1035901 |
| SRR1406747 |
| SRR1406748 |
| TDFs (visualization files) | Zip archive | 343 Mb |
| Read counts and bidirectional calls | Zip archive | 48 Mb |
| SRP accession | SRP033253 |
| GEO accession | GSE52642 |
| Protocol | GRO-seq |
| Organisms | H. sapiens |
| Library Prep | circularization |
| Spike-in | |
| Published | Yes |
| Year | 2014 |
| First Author | Kaikkonen |
| Last Author | Yla-Herttuala |
| DOI | 10.1093/nar/gku1036 |
| Full citation | Minna U. Kaikkonen, Henri Niskanen, Casey E. Romanoski, Emilia Kansanen, Annukka M. Kivela, Jarkko Laitlainen, Sven Heinz, Christopher Benner, Christopher K. Glass, and Seppo Yla-Herttuala. Control of VEGF-A transcriptional programs by pausing and genomic compartmentalization. Nucleic Acids Research, 42(20):12570-12584, 2014. |
|
Median QC score
|
2.0 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | Yes |
| Other Seq? | No |