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Paper Details
Parida2019nucleotide
| SRR8456237 |
| SRR8456238 |
| SRR8463311 |
| SRR8463312 |
| SRR7041686 |
| SRR7041689 |
| SRR7041690 |
| SRR8451931 |
| SRR8451932 |
| SRR8452660 |
| SRR8452661 |
| SRR8457216 |
| SRR8457217 |
| TDFs (visualization files) | Zip archive | 885 Mb |
| Read counts and bidirectional calls | Zip archive | 103 Mb |
| SRP accession | SRP141182 |
| GEO accession | GSE113394 |
| Protocol | PRO-cap, PRO-seq |
| Organisms | H. sapiens |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2019 |
| First Author | Parida |
| Last Author | Price |
| DOI | 10.1128/mBio.02047-18 |
| Full citation | Mrutyunjaya Parida, Kyle A. Nilson, Ming Li, Christopher B. Ball, Harrison A. Fuchs, Christine K. Lawson, Donal S. Luse, Jeffery L. Meier, and David H. Price. Nucleotide resolution comparison of transcription of human cytomegalovirus and host genomes reveals universal use of RNA polymerase II elongation control driven by dissimilar core promoter elements. mBio, 10(1), 2019. |
|
Median QC score
|
3.0 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | No |