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Paper Details
Xiao2019pervasive
| TDFs (visualization files) | Zip archive | 1.0 Gb |
| Read counts and bidirectional calls | Zip archive | 277 Mb |
| SRP accession | SRP162015 |
| GEO accession | GSE120105 |
| Protocol | GRO-seq |
| Organisms | H. sapiens |
| Library Prep | circularization |
| Spike-in | |
| Published | Yes |
| Year | 2019 |
| First Author | Xiao |
| Last Author | Fu |
| DOI | 10.1016/j.cell.2019.06.001 |
| Full citation | Rui Xiao, Jia-Yu Chen, Zhengyu Liang, Daji Luo, Geng Chen, Zhi John Lu, Yang Chen, Bing Zhou, Hairi Li, Xian Du, Yang Yang, Mingkui San, Xintao Wei, Wen Liu, Eric Lecuyer, Brenton R. Graveley, Gene W. Yeo, Christopher B. Burge, Michael Q. Zhang, Yu Zhou, Xiang-Dong Fu. Pervasive chromatin-rna binding protein interactions enable RNA-based regulation of transcription. Cell, 178(1):107-121, 2019. |
|
Median QC score
|
4.0 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | Yes |
| 3D Seq? | Yes |
| Other Seq? | No |