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Paper Details
Danko2018dynamic
| TDFs (visualization files) | Zip archive | 3.7 Gb |
| Read counts and bidirectional calls | Zip archive | 73 Mb |
| SRP accession | SRP081110 |
| GEO accession | GSE85337 |
| Protocol | PRO-seq |
| Organisms | M. mulatta, M. musculus, P. troglodytes, R. norvegicus, H. sapiens |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2018 |
| First Author | Danko |
| Last Author | Siepel |
| DOI | 10.1038/s41559-017-0447-5 |
| Full citation | Charles G. Danko, Lauren A. Choate, Brooke A. Marks, Edward J. Rice, Zhong Wang, Tinyi Chu, Andre L. Martins, Noah Dukler, Scott A. Coonrod, Elia D. Tait Wojno, John T. Lis, W. Lee Kraus, and Adam Siepel. Dynamic evolution of regulatory element ensembles in primate CD4+ T cells. Nature Ecology & Evolution, 2(3):537-548, 2018. |
|
Median QC score
|
3.0 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | No |