Etchegaray2019histone
Downloads (all samples in dataset)
TDFs (visualization files) Zip archive 1.7 Gb
Read counts and bidirectional calls Zip archive 60 Mb
Paper Details
SRP accession SRP194939
GEO accession GSE130691
Protocol PRO-seq
Organisms M. musculus
Library Prep ligation
Spike-in D. melanogaster
Published Yes
Year 2019
First Author Etchegaray
Last Author Mostoslavsky
DOI 10.1016/j.molcel.2019.06.034
Full citation Jean-Pierre Etchegaray, Lei Zhong, Catherine Li, Telmo Henriques, Eileen Ablondi, Tomoyoshi Nakadai, Capucine Van Rechem, Christina Ferrer, Kenneth N. Ross, Jee-Eun Choi, Ann Samarakkody, Fei Ji, Andrew Chang, Ruslan I. Sadreyev, Sridhar Ramaswamy, Sergei Nechaev, Johnathan R. Whetstine, Robert G. Roeder, Karen Adelman, Alon Goren, and Raul Mostoslavsky. The histone deacetylase SIRT6 restrains transcription elongation via promoter-proximal pausing. Molecular cell, 75(4):683-699, 2019.
Median QC score
Information
1.0
ATAC-seq? No
RNA-seq? No
ChIP-seq? Yes
3D Seq? No
Other Seq? Yes