Ji2013sr
Downloads (all samples in dataset)
All metadata TXT 7 Kb
TDFs (visualization files) ZIP archive 122 Mb
Read counts and bidirectional calls ZIP archive 36 Mb
Paper Details
SRP accession SRP020006
GEO accession GSE45517
Protocol GRO-seq
Organisms M. musculus
Library Prep circularization
Spike-in
Published Yes
Year 2013
First Author Ji
Last Author Fu
DOI 10.1016/j.cell.2013.04.028
Full citation Xiong Ji, Yu Zhou, Shatakshi Pandit, Jie Huang, Hairi Li, Charles Y. Lin, Rui Xiao, Christopher B. Burge, and Xiang-Dong Fu. SR proteins collaborate with 7SK and promoter-associated nascent RNA to release paused polymerase. Cell, 153(4):855-868, May 2013.
Median QC score
Information
4.0
ATAC-seq? No
RNA-seq? No
ChIP-seq? Yes
3D Seq? No
Other Seq? No