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Paper Details
Bi2020enhancer
| TDFs (visualization files) | Zip archive | 2.1 Gb |
| Read counts and bidirectional calls | Zip archive | 145 Mb |
| SRP accession | SRP188708 |
| GEO accession | GSE128452 |
| Protocol | GRO-seq |
| Organisms | H. sapiens |
| Library Prep | circularization |
| Spike-in | |
| Published | Yes |
| Year | 2020 |
| First Author | Bi |
| Last Author | Liu |
| DOI | 10.1038/s41556-020-0514-z |
| Full citation | Mingjun Bi, Zhao Zhang, Yi-Zhou Jiang, Pengya Xue, Hu Wang, Zhao Lai, Xiaoyong Fu, Carmine De Angelis, Yue Gong, Zhen Gao, Jianhua Ruan, Victor X. Jin, Elisabetta Marangoni, Elodie Montaudon, Christopher K. Glass, Wei Li, Tim Hui-Ming Huang, Zhi-Ming Shao, Rachel Schiff, Lizhen Chen, and Zhijie Liu. Enhancer reprogramming driven by high-order assemblies of transcription factors promotes phenotypic plasticity and breast cancer endocrine resistance. Nature Cell Biology, 22(6):701-715, June 2020. |
|
Median QC score
|
2.0 |
| ATAC-seq? | Yes |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |