Chen2018augmented
Downloads (all samples in dataset)
TDFs (visualization files) Zip archive 557 Mb
Read counts and bidirectional calls Zip archive 125 Mb
Paper Details
SRP accession SRP102697
GEO accession GSE97183
Protocol GRO-seq
Organisms H. sapiens
Library Prep ligation
Spike-in
Published Yes
Year 2018
First Author Chen
Last Author Fu
DOI 10.1016/j.molcel.2017.12.029
Full citation Liang Chen, Jia-Yu Chen, Yi-Jou Huang, Ying Gu, Jinsong Qiu, Hao Qian, Changwei Shao, Xuan Zhang, Jing Hu, Hairi Li, Shunmin He, Yu Zhou, Omar Abdel-Wahab, Dong-Er Zhang, and Xiang-Dong Fu. The augmented R-loop is a unifying mechanism for Myelodysplastic syndromes induced by high-risk splicing factor mutations. Molecular Cell, 69(3):412, 2018.
Median QC score
Information
3.0
ATAC-seq? No
RNA-seq? No
ChIP-seq? Yes
3D Seq? No
Other Seq? No