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Daniel2018nuclear
| SRR5714119 |
| SRR5714120 |
| SRR3407137 |
| SRR3407138 |
| SRR3407139 |
| SRR3407140 |
| SRR6687446 |
| All metadata | TXT | 9 Kb |
| TDFs (visualization files) | ZIP archive | 250 Mb |
| Read counts and bidirectional calls | ZIP archive | 44 Mb |
| SRP accession | SRP073648 |
| GEO accession | , GSE110464 |
| Protocol | GRO-seq |
| Organisms | M. musculus |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2018 |
| First Author | Daniel |
| Last Author | Nagy |
| DOI | 10.1016/j.immuni.2018.09.005 |
| Full citation | Bence Daniel, Gergely Nagy, Zsolt Czimmerer, Attila Horvath, David W. Hammers, Ixchelt Cuaranta-Monroy, Szilard Poliska, Petros Tzerpos, Zsuzsanna Kolostyak, Tristan T. Hays, Andreas Patsalos, Rene Houtman, Sascha Sauer, Jean Francois-Deleuze, Fraydoon Rastinejad, Balint L. Balint, H. Lee Sweeney, and Laszlo Nagy. The nuclear receptor ppar-gamma controls progressive macrophage polarization as a ligand-insensitive epigenomic ratchet of transcriptional memory. Immunity, 49(4):615-626, 2018. |
|
Median QC score
|
3.0 |
| ATAC-seq? | Yes |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |