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Daniel2018nuclear
SRR5714119 |
SRR5714120 |
SRR3407137 |
SRR3407138 |
SRR3407139 |
SRR3407140 |
SRR6687446 |
TDFs (visualization files) | Zip archive | 250 Mb |
Read counts and bidirectional calls | Zip archive | 44 Mb |
SRP accession | SRP073648 |
GEO accession | , GSE110464 |
Protocol | GRO-seq |
Organisms | M. musculus |
Library Prep | ligation |
Spike-in | |
Published | Yes |
Year | 2018 |
First Author | Daniel |
Last Author | Nagy |
DOI | 10.1016/j.immuni.2018.09.005 |
Full citation | Bence Daniel, Gergely Nagy, Zsolt Czimmerer, Attila Horvath, David W. Hammers, Ixchelt Cuaranta-Monroy, Szilard Poliska, Petros Tzerpos, Zsuzsanna Kolostyak, Tristan T. Hays, Andreas Patsalos, Rene Houtman, Sascha Sauer, Jean Francois-Deleuze, Fraydoon Rastinejad, Balint L. Balint, H. Lee Sweeney, and Laszlo Nagy. The nuclear receptor ppar-gamma controls progressive macrophage polarization as a ligand-insensitive epigenomic ratchet of transcriptional memory. Immunity, 49(4):615-626, 2018. |
Median QC score
|
3.0 |
ATAC-seq? | Yes |
RNA-seq? | Yes |
ChIP-seq? | Yes |
3D Seq? | No |
Other Seq? | No |