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Paper Details
Lloret-llinares2018rna
| SRR7300121 |
| SRR7300122 |
| SRR7300123 |
| SRR7300124 |
| SRR7300125 |
| SRR7300126 |
| SRR7300127 |
| SRR7300128 |
| SRR7638782 |
| SRR7638783 |
| SRR7638784 |
| SRR7638785 |
| TDFs (visualization files) | Zip archive | 1.1 Gb |
| Read counts and bidirectional calls | Zip archive | 87 Mb |
| SRP accession | SRP150409 , SRP156202 |
| GEO accession | GSE115713 , GSE118052 |
| Protocol | PRO-seq |
| Organisms | M. musculus |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2018 |
| First Author | Lloret-Llinares |
| Last Author | Jensen |
| DOI | 10.1093/nar/gky817 |
| Full citation | Marta Lloret-Llinares, Evdoxia Karadoulama, Yun Chen, Luke A. Wojenski, Geno J. Villafano, Jette Bornholdt, Robin Andersson, Leighton Core, Albin Sandelin, and Torben Heick Jensen. The RNA exosome contributes to gene expression regulation during stem cell differentiation. Nucleic acids research, 46(21):11502-11513, 2018. |
|
Median QC score
|
1.0 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | Yes |