Puc2015ligand
Downloads (all samples in dataset)
TDFs (visualization files) Zip archive 1.4 Gb
Read counts and bidirectional calls Zip archive 159 Mb
Paper Details
SRP accession SRP049720
GEO accession GSE63202
Protocol GRO-seq, PRO-cap
Organisms H. sapiens
Library Prep circularization, ligation
Spike-in
Published Yes
Year 2015
First Author Puc
Last Author Rosenfeld
DOI 10.1016/j.cell.2014.12.023
Full citation Janusz Puc, Piotr Kozbial, Wenbo Li, Yuliang Tan, Zhijie Liu, Tom Suter, Kenneth A. Ohgi, Jie Zhang, Aneel K. Aggarwal, and Michael G. Rosenfeld. Ligand-dependent enhancer activation regulated by topoisomerase-I activity. Cell, 160(3):367-380, 2015.
Median QC score
Information
2.5
ATAC-seq? No
RNA-seq? No
ChIP-seq? Yes
3D Seq? No
Other Seq? No