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Toropainen2016global
| SRR3923617 |
| SRR3923618 |
| SRR3923619 |
| SRR3923620 |
| SRR3923621 |
| SRR3923622 |
| SRR4001595 |
| SRR4001596 |
| SRR4001597 |
| SRR4001598 |
| All metadata | TXT | 10 Kb |
| TDFs (visualization files) | ZIP archive | 819 Mb |
| Read counts and bidirectional calls | ZIP archive | 85 Mb |
| SRP accession | SRP078536 |
| GEO accession | GSE84432 |
| Protocol | GRO-seq |
| Organisms | H. sapiens |
| Library Prep | circularization |
| Spike-in | |
| Published | Yes |
| Year | 2016 |
| First Author | Toropainen |
| Last Author | Palvimo |
| DOI | 10.1038/srep33510 |
| Full citation | Sari Toropainen, Einari A. Niskanen, Marjo Malinen, Paivi Sutinen, Minna U. Kaikkonen, and Jorma J. Palvimo. Global analysis of transcription in castration-resistant prostate cancer cells uncovers active enhancers and direct androgen receptor targets. Sci Rep, 6:33510, Sep 2016. |
|
Median QC score
|
1.0 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |