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Paper Details
Agarwal2021kdm1a
| TDFs (visualization files) | Zip archive | 2.0 Gb |
| Read counts and bidirectional calls | Zip archive | 117 Mb |
| SRP accession | SRP097614 , SRP097628 |
| GEO accession | GSE93938 , GSE93951 |
| Protocol | Bru-seq, GRO-seq |
| Organisms | M. musculus |
| Library Prep | ligation, circularization |
| Spike-in | |
| Published | Yes |
| Year | 2021 |
| First Author | Agarwal |
| Last Author | Iwase |
| DOI | 10.1101/gr.234559.118 |
| Full citation | Saurabh Agarwal, Katherine M. Bonefas, Patricia M. Garay, Emily Brookes, Yumie Murata-Nakamura, Robert S. Porter, Todd S. Macfarlan, Bing Ren, and Shigeki Iwase. KDM1A maintains genome-wide homeostasis of transcriptional enhancers. Genome Research, 31:186-197, Jan 2021. |
|
Median QC score
|
1.0 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |